Publications 2018

Tinterri A et al.
Active intermixing of indirect and direct neurons builds the striatal mosaic
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-07171-4

Benchouaia M et al.
Comparative Transcriptomics Highlights New Features of the Iron Starvation Response in the Human Pathogen Candida glabrata
Frontiers in Microbiology 2018 9
doi: 10.3389/fmicb.2018.02689

Boulay AC et al.
Connexin 43 Controls the Astrocyte Immunoregulatory Phenotype
Brain Sciences 2018 8(4)
doi: 10.3390/brainsci8040050

Andersson L et al.
Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project
Genome Biology 2015 16(1)
doi: 10.1186/s13059-015-0622-4

Dardalhon-Cuménal D et al.
Cyclin G and the Polycomb Repressive complexes PRC1 and PR-DUB cooperate for developmental stability
PLOS Genetics 2018 14(7)
doi: 10.1371/journal.pgen.1007498

Vizziano-Cantonnet D et al.
De novo transcriptome analysis to search for sex-differentiation genes in the Siberian sturgeon
General and Comparative Endocrinology 2018 268
doi: 10.1016/j.ygcen.2018.08.007

Wu X et al.
Developmental and cancer-associated plasticity of DNA replication preferentially targets GC-poor, lowly expressed and late-replicating regions
Nucleic Acids Research 2018 46(19)
doi: 10.1093/nar/gky797

Nicot F et al.
Diversity of hepatitis E virus genotype 3
Reviews in Medical Virology 2018 28(5)
doi: 10.1002/rmv.1987

Gschloessl B et al.
Draft genome and reference transcriptomic resources for the urticating pine defoliator Thaumetopoea pityocampa(Lepidoptera: Notodontidae
Mol Ecol Resour.2018 18:602–619
doi: 10.1111/1755-0998.12756

van den Beek M et al.
Dual-layer transposon repression in heads of Drosophila melanogaster
RNA 2018 24(12)
doi: 10.1261/rna.067173.118

Torres-Cortés G et al.
Functional Microbial Features Driving Community Assembly During Seed Germination and Emergence
Frontiers in Plant Science 2018 9
doi: 10.3389/fpls.2018.00902

Gaulin E et al.
Genomics analysis of Aphanomyces spp. identifies a new class of oomycete effector associated with host adaptation
BMC Biology 2018 16(1)
doi: 10.1186/s12915-018-0508-5

Maroilley T et al.
Immunome differences between porcine ileal and jejunal Peyer's patches revealed by global transcriptome sequencing of gut-associated lymphoid tissues
Scientific Reports 2018 8(1)
doi: 10.1038/s41598-018-27019-7

Rousseau E et al.
Impact of genetic drift, selection and accumulation level on virus adaptation to its host plants
Molecular Plant Pathology 2018 19(12)
doi: 10.1111/mpp.12730

Bartoli C et al.
In situ relationships between microbiota and potential pathobiota in Arabidopsis thaliana
The ISME Journal 2018 12(8)
doi: 10.1038/s41396-018-0152-7

Chasseigneaux S et al.
Isolation and differential transcriptome of vascular smooth muscle cells and mid-capillary pericytes from the rat brain
Scientific Reports 2018 8(1)
doi: 10.1038/s41598-018-30739-5

Thion MS et al.
Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner
Cell 2018 172(3)
doi: 10.1016/j.cell.2017.11.042

Morin-Brureau M et al.
Microglial phenotypes in the human epileptic temporal lobe
Brain 2018 141(12)
doi: 10.1093/brain/awy276

Bonin E et al.
Molecular subtyping of European swine influenza viruses and scaling to high-throughput analysis
Virology Journal 2018 15(1)
doi: 10.1186/s12985-018-0920-z

Plomion C et al.
Oak genome reveals facets of long lifespan
Nature Plants 2018 4(7)
doi: 10.1038/s41477-018-0172-3

Illikoud N et al.
One complete and three draft genome sequences of four Brochothrix thermosphacta strains CD 337, TAP 175, BSAS1 3 and EBP 3070
Standards in Genomic Sciences 2018
doi: 10.1186/s40793-018-0333-z

Willmann C et al.
Oral health status in historic population: Macroscopic and metagenomic evidence
PLOS ONE 2018 13(5)
doi: 10.1371/journal.pone.0196482

Mat AM et al.
Oyster transcriptome response to Alexandrium exposure is related to saxitoxin load and characterized by disrupted digestion, energy balance and calcium and sodium signaling
Aquatic Toxicology 2018 199
doi:  10.1016/j.aquatox.2018.03.030

Clerissi C et al.
Parallels between experimental and natural evolution of legume symbionts
Nature Communications 2018 9(1)
doi: 10.1038/s41467-018-04778-5

Robles M et al.
Placental function and structure at term is altered in broodmares fed with cereals from mid-gestation
Placenta 2018 64
doi: 10.1016/j.placenta.2018.02.003

Payelleville A et al.
The complete methylome of an entomopathogenic bacterium reveals the existence of loci with unmethylated Adenines
Scientific Reports 2018 8(1)
doi: 10.1038/s41598-018-30620-5

Zarrillo S et al.
The use and domestication of Theobroma cacao during the mid-Holocene in the upper Amazon
Nature Ecology & Evolution 2018 2(12)
doi: 10.1038/s41559-018-0697-x

Duron O et al.
Tick-Bacteria Mutualism Depends on B Vitamin Synthesis Pathways
Current Biology 2018 28(12)
doi: 10.1016/j.cub.2018.04.038

Segura A et al.
Transcriptomic analysis reveals specific metabolic pathways of enterohemorrhagic Escherichia coli O157:H7 in bovine digestive contents
BMC Genomics 2018 19(1)
doi:  10.1186/s12864-018-5167-y

Pecrix Y et al.
Whole-genome landscape of Medicago truncatula symbiotic genes
Nature Plants 2018 4(12)
doi: 10.1038/s41477-018-0286-7