Publications 2015

Vanhille L. et al.
High-throughput and quantitative assessment of enhancer activity in mammals by CapStarr-seq
Nat Commun. 2015 6, 6905
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Zacarias-Cabeza,J. et al.
Transcription-Dependent Generation of a Specialized Chromatin Structure at the TCRbeta Locus
J. Immunol. < 2015 194, 3432-3443 doi:

Bond J. et al.
An Early Thymic Precursor Phenotype Predicts Outcome Exclusively in HOXA-overexpressing Adult T-ALL: a GRAALL Study
The Lancet Haematology 2015
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Bai Q et al.
Temporal analysis of genome alterations induced by single-cell passaging in human embryonic stem cells
Stem Cells Dev. 2015 24:653-62
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Delaby Cet al.
Central Nervous System and Peripheral Inflammatory Processes in Alzheimer's Disease: Biomarker Profiling Approach
Front Neurol. 2015 6:181
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Ozmadenci D. et al.
Netrin-1 regulates somatic cell reprogramming and pluripotency maintenance
Nat Commun. 2015 6:7398
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Garcin G, Guiraud I, Lacroix M, Genthon C, Rialle S, Joujoux JM, Meunier L, Lavabre-Bertrand T, Stoebner PE, Le Gallic L
(2015) AMPK/HuR-Driven IL-20 Post-Transcriptional Regulation in Psoriatic Skin
J Invest Dermatol. 2015 135:2732-41
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Audo R. et al.
Identification of genes regulating TRAIL-induced apoptosis in rheumatoid arthritis fibroblasts-like synoviocytes
Genes Immun. 2015 16:462-9
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Bertrand B. et al.
The greater phenotypic homeostasis of the allopolyploid Coffea arabica improved the transcriptional homeostasis over that of both diploid parents
Plant Cell Physiol. 2015 56:2035-51
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Roquis D. et al.
The epigenome of Schistosoma mansoni provides insight about how Cercariae poise transcription until infection
PLoS Negl Trop Dis. 2015 9:e0003853
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Combes MC. et al.
Regulatory divergence between parental alleles determines gene expression patterns in hybrids
Genome Biol Evol. 2015 7:1110-21
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Diouf F. et al.
Genetic and Genomic Diversity Studies of Acacia Symbionts in Senegal Reveal New Species of Mesorhizobium with a Putative Geographical Pattern
PLoS One.. 2015 10:e0117667
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Dheilly NM. et al.
Who is the puppet master? Replication of a parasitic wasp-associated virus correlates with host behaviour manipulation
Proc Biol Sci. 2015 282: 20142773
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Rodier G. et al.
The transcription factor E4F1 coordinates CHK1-dependent checkpoint and mitochondrial functions
Cell Rep. 2015 11:220-33
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Al Adhami H. et al.
A systems-level approach to parental genomic imprinting: the imprinted gene network includes extracellular matrix genes and regulates cell cycle exit and differentiation
Genome Res. 2015 25:353-67
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Reynders A. et al.
Transcriptional Profiling of Cutaneous MRGPRD Free Nerve Endings and C-LTMRs
Cell Rep. 2015 S2211-1247(15)00047-9
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Dheilly NM. et al.
A family of variable immunoglobulin and lectin domain containing molecules in the snail Biomphalaria glabrata
Dev Comp Immunol. 2015 48:234-43
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Holmes A. et al.
Mechanistic signatures of HPV insertions in cervical carcinomas
Npj Genomic Medicine. 2015
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Lebofsky R. et al.
Circulating tumor DNA as a non-invasive substitute to metastasis biopsy for tumor genotyping and personalized medicine in a prospective trial across all tumor types
Molecular Oncology. 2015
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Madic J. et al.
Circulating tumor DNA and circulating tumor cells in metastatic triple negative breast cancer patients
Int. J. Cancer. 2015
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Grünewald, T.G.P. et al.
Chimeric EWSR1-FLI1 regulates the Ewing sarcoma susceptibility gene EGR2 via a GGAA microsatellite
Nature Genetics. 2015
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Bellini A. et al.
Deep sequencing reveals occurrence of sub-clonal ALK mutations in neuroblastoma at diagnosis
Clin. Cancer Res. 2015
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Smith M.J. et al.
Mutations in LZTR1 add to the complex heterogeneity of schwannomatosis
Neurology. 2015
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Manfrini N. et al.
RNA-processing proteins regulate Mec1/ATR activation by promoting generation of RPA-coated ssDNA
EMBO Rep. 2015
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Libertini E. et al.
Overexpression of the Heterochromatinization Factor BAHD1 in HEK293 Cells Differentially Reshapes the DNA Methylome on Autosomes and X Chromosome
Front Genet. 2015 1;6:339
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Balloy V. et al.
Normal and Cystic Fibrosis Human Bronchial Epithelial Cells Infected with Pseudomonas aeruginosa Exhibit Distinct Gene Activation Patterns
PLoS One. 2015 10(10):e014097
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Rosinski-Chupin I. et al.
Single nucleotide resolution RNA-seq uncovers new regulatory mechanisms in the opportunistic pathogen Streptococcus agalactiae
BMC Genomics. 2015 16:419
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Freel KC. et al.
Adaptation in Toxic Environments: Arsenic Genomic Islands in the Bacterial Genus Thiomonas
PLoS One. 2015 10(9):e013901
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Vembar SS. et al.
The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages
Genome Biol.. 2015 16:212
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Dequivre M. et al.
Small RNA Deep-Sequencing Analyses Reveal a New Regulator of Virulence in Agrobacterium fabrum C58
Mol Plant Microbe Interact. 2015 28(5):580-9
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