Publications 2016

O'Grady GL. et al.
Variants in the Oxidoreductase PYROXD1 Cause Early-Onset Myopathy with Internalized Nuclei and Myofibrillar Disorganization
Am J Hum Genet. (2016) .99(5):1086-1105
doi: 10.1016/j.ajhg.2016.09.005

Fortuna TM. et al.
Polymorphic Microsatellite Markers for the Tetrapolar Anther-Smut Fungus Microbotryum saponariae Based on Genome Sequencing
PLoS One. (2016) 11(11):e0165656
doi: 10.1371/journal.pone.0165656

Chicard, M. et al.
Genomic Copy Number Profiling Using Circulating Free Tumor DNA Highlights Heterogeneity in Neuroblastoma
Clin Cancer Res. (2016) 22(22):5564-5573
doi: 10.1158/1078-0432.CCR-16-0500

Loubiere V. et al.
Coordinate redeployment of PRC1 proteins suppresses tumor formation during Drosophila development
Nat Genet. (2016) 48:1436-42
doi: 10.1038/ng.3671

Pincez T. et al.
Feasibility and clinical integration of molecular profiling for target identification in pediatric solid tumors
Pediatr Blood Cancer. (2016) Nov 29
doi: 10.1002/pbc.26365

Ji B. et al.
The chimeric nature of the genomes of marine magnetotactic coccoid-ovoid bacteria defines a novel group of Proteobacteria
Environ Microbiol. (2016) Nov 30
doi: 10.1111/1462-2920.13637

Arguel MJ. et al.
A cost effective 5' selective single cell transcriptome profiling approach with improved UMI design
Nucleic Acids Res. (2016) Dec 9. pii: gkw1242
doi:

Zangari J. et al.
Rapid decay of engulfed extracellular miRNA by XRN1 exonuclease promotes transient epithelial-mesenchymal transition
Nucleic Acids Res. (2016) Dec 19. pii: gkw1284
doi:

Alzaid F. et al.
IRF5 governs liver macrophage activation that promotes hepatic fibrosis in mice and humans
JCI Insight. (2016) Dec 8. 1(20):e88689
doi:

Schartner V. et al.
Dihydropyridine receptor (DHPR, CACNA1S) congenital myopathy
Acta Neuropathol. (2016) Dec 23
doi: 10.1007/s00401-016-1656-8

Le Guennec K. et al.
17q21.31 duplication causes prominent tau-related dementia with increased MAPT expression
Mol Psychiatry. (2016) Dec 13
doi: 10.1038/mp.2016.226

Troupin C. et al.
Large-Scale Phylogenomic Analysis Reveals the Complex Evolutionary History of Rabies Virus in Multiple Carnivore Hosts
PLoS Pathog. (2016) 12(12):e1006041
doi: 10.1371/journal.ppat.1006041

Roux PF. et al.
The Extent of mRNA Editing Is Limited in Chicken Liver and Adipose, but Impacted by Tissular Context, Genotype, Age, and Feeding as Exemplified with a Conserved Edited Site in COG3
G3 (Genes,Genomes,Genetics). (2015) 6(2):321-35
doi: 10.1534/g3.115.022251

Eckenfelder A. et al.
Argonaute proteins regulate HIV-1 multiply spliced RNA and viral production in a Dicer independent manner
Nucleic Acids Res. (2016)
doi: 10.1093/nar/gkw1289

Lelandais G. et al.
ChIPseq in Yeast Species: From Chromatin Immunoprecipitation to High-Throughput Sequencing and Bioinformatics Data Analyses
Methods Mol Biol. (2016) 1361:185-202
doi: 10.1007/978-1-4939-3079-1_11

Redko Y. et al.
RNase J depletion leads to massive changes in mRNA abundance in Helicobacter pylori
RNA Biol. (2016) 13(2):243-53
doi: 10.1080/15476286.2015.1132141

Galindo-Albarrán AO. et al.
CD8+ T Cells from Human Neonates Are Biased toward an Innate Immune Response
Cell reports. (2016)
doi: 10.1016/j.celrep.10.056

Paban V. et al.
Molecular gene expression following blunt and rotational models of traumatic brain injury parallel injuries associated with stroke and depression
Journal of Translational Science. (2016)
doi: 10.15761/JTS.1000159

Amrani A. et al.
Deciphering the adaptation strategies of Desulfovibrio piezophilus to hydrostatic pressure through metabolic and transcriptional analyses
Environmental microbiology reports. (2016)
doi: 10.1111/1758-2229.12427

Sakakini N. et al.
A Positive Feed-forward Loop Associating EGR1 and PDGFA Promotes Proliferation and Self-renewal in Glioblastoma Stem Cells
The journal of biological chemistry. (2016)
doi: 10.1074/jbc.M116.720698

Paban V. et al.
Omics analysis of mouse brain models of human diseases
Gene. (2016)
doi: 10.1016/j.gene.2016.11.022

Venton G. et al.
Natural killer cells in acute myeloid leukemia patients: from phenotype to transcriptomic analysis
mmunologic research. (2016)
doi: 10.1007/s12026-016-8848-0

Landel V. et al.
Vitamin D interacts with Esr1 and Igf1 to regulate molecular pathways relevant to Alzheimer's disease
Molecular Neurodegeneration. (2016)
doi: 10.1186/s13024-016-0087-2

Zedane L. et al.
Museomics illuminate the history of an extinct, paleoendemic plant lineage (Hesperelaea, Oleaceae) known from an 1875 collection from Guadalupe Island, Mexico
Biological Journal of the Linnean Society
doi: (2016) 117, 44-57

Koechler S. et al.
Arsenite response in Coccomyxa sp. Carn explored by transcriptomic and non-targeted metabolomic approaches
Environmental Microbiology. (2016) pr.18(4):1289-300
doi: 10.1111/1462-2920.13227

Mayjonade B. et al.
Extraction of high-molecular-weight genomic DNA for long-read sequencing of single molecules
BioTechniques. (2016) 61:203-205
doi: 10.2144/000114460

Boussaha M. et al.
Construction of a large collection of small genome variations in French dairy and beef breeds using whole-genome sequences
Genetics Selection Evolution. (2016) 48:87
doi: 10.1186/s12711-016-0268-z

Letaief R. et al.
Identification and characterization of copy number variations in cattle
Journal of Animal Science. (2016) 183-183
doi: 10.2527/jas.94 supplement4183a

Niewiadomska-Cimicka A. et al.
Genome-wide Analysis of RARbeta Transcriptional Targets in Mouse Striatum Links Retinoic Acid Signaling with Huntington's Disease and Other Neurodegenerative Disorders
Mol Neurobiol. (2016) [Epub ahead of print] PubMed PMID: 27405468
doi:

Gies V. et al.
B cells differentiate in Human thymus and express AIRE
The Journal of Allergy and Clinical Immunology. (2016) pii: S0091-6749(16)31295-7
doi: 10.1016/j.jaci.2016.09.044