Publications 2017

Fragoso CA. et al.
Genetic architecture of a rice nested association mapping population.
G3 (2017) Jun. 7(6):1913-1926.
doi: 10.1534/g3.117.041608

Spirhanzlova P. et al.
Construction and characterization of a BAC library for functional genomics in Xenopus tropicalis.
Dev Biol. (2017) Jun. 426(2):255-260.
doi: 10.1016/j.ydbio.2016.05.015

Kassambara A. et al.
Global miRNA expression analysis identifies novel key regulators of plasma cell differentiation and malignant plasma cell.
Nucleic Acids Res. (2017) Jun. 45(10):5639-5652.
doi: 10.1093/nar/gkx327

Jegu T. et al.
The Arabidopsis SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility.
Genome Biol. (2017) Jun. 18(1):114.
doi: 10.1186/s13059-017-1246-7

Papin C. et al.
Combinatorial DNA methylation codes at repetitive elements.
Genome Res. (2017) Jun. 27(6):934-946.
doi: 10.1101/gr.213983.116

Contrepois K. et al.
Histone variant H2A.J accumulates in senescent cells and promotes inflammatory gene expression.
Nat Commun. (2017) May. 8:14995.
doi: 10.1038/ncomms14995

Hautefort A. et al.
Pulmonary endothelial cell DNA methylation signature in pulmonary arterial hypertension.
Oncotarget (2017) May. 8(32):52995-53016.
doi: 10.18632/oncotarget.18031

Haziza S. et al.
Fluorescent nanodiamond tracking reveals intraneuronal transport abnormalities induced by brain-disease-related genetic risk factors.
Nat Nanotechnol. (2017) May. 12(4):322-328.
doi: 10.1038/nnano.2016.260

Boyer F. et al.
CSReport: A new computational tool designed for automatic analysis of class switch recombination junctions sequenced by high-throughput sequencing..
J Immunol. (2017) May.198(10):4148-4155.
doi: 10.4049/jimmunol.1601924

Cerisy T. et al.
Evolution of a biomass-fermenting Bacterium to resist lignin phenolics.
Appl Environ Microbiol. (2017) May. 83(11). pii: e00289-17.
doi: 10.1128/AEM.00289-17

Richer W. et al.
Embryonic signature distinguishes pediatric and adult rhabdoid tumors from other SMARCB1-deficient cancers.
Oncotarget (2017) May. 8(21):34245-34257.
doi: 10.18632/oncotarget.15939

Euceda LR. et al.
Metabolic response to Everolimus in patient-derived triple-negative breast cancer xenografts.
J Proteome Res. (2017) May. 16(5):1868-1879.
doi: 10.1021/acs.jproteome.6b00918

Sobhani I. et al.
Microbiota as a new indicator of colorectal cancer (CRC) heterogeneity.
J Clin Oncology (2017) May. 35(15) suppl 3615-3615.
doi: doi :10.1200/JCO.2017.35.15_suppl.3615

Leroy M. et al.
Rae1/YacP, a new endoribonuclease involved in ribosome-dependent mRNA decay in Bacillus subtilis.
EMBO J. (2017) May. 36(9):1167-1181.
doi: 10.15252/embj.201796540

Abdou E. et al.
RegA plays a key role in oxygen-dependent establishment of persistence and in isocitrate lyase activity, a critical determinant of in vivo Brucella suis pathogenicity.
Front Cell Infect Microbiol. (2017) May. 7:186.
doi: 10.3389/fcimb.2017.00186

Cottard F. et al.
Dual effects of constitutively active androgen receptor and full-length androgen receptor for N-cadherin regulation in prostate cancer.
Oncotarget (2017) May. 8(42):72008-72020.
doi: 10.18632/oncotarget.18270

Fabre E. et al.
Noumeavirus replication relies on a transient remote control of the host nucleus.
Nat Commun. (2017) Apr. 8:15087.
doi: 10.1038/ncomms15087

Mohamad R. et al.
Mesorhizobium delmotii and Mesorhizobium prunaredense are two new species containing rhizobial strains within the symbiovar anthyllidis.
Syst Appl Microbiol. (2017) Apr. 40:135-143
doi: 10.1016/j.syapm.2017.01.004

Barral S. et al.
Histone variant H2A.L.2 guides transition protein-dependent protamine assembly in male germ cells .
Molecular Cell (2017) Apr. 66(1):89-101.e8.
doi: 10.1016/j.molcel.2017.02.025

Eckenfelder A. et al.
Argonaute proteins regulate HIV-1 multiply spliced RNA and viral production in a Dicer independent manner.
Nucleic Acids Res. (2017) Apr. 45(7):4158-4173.
doi: 10.1093/nar/gkw1289

Faucon F. et al.
In the hunt for genomic markers of metabolic resistance to pyrethroids in the mosquito Aedes aegypti: An integrated next-generation sequencing approach.
PLoS Negl. Trop. Dis. (2017) Apr. 11(4):e0005526.
doi: 10.1371/journal.pntd.0005526

Marchetti M. et al.
Experimental evolution of rhizobia may lead to either extra- or intracellular symbiotic adaptation depending on the selection regime.
Mol. Ecol. (2017) Apr. 26(7):1818-1831.
doi: 10.1111/mec.13895

Deutsch S-M. et al.
Deutsch S-M. et al. Identification of proteins involved in the anti-inflammatory properties of Propionibacterium freudenreichii by means of a multi-strain study.
Sci. Rep. (2017) Apr. 7:46409.
doi: 10.1038/srep46409

Erill I. et al.
Comparative analysis of Ralstonia solanacearum methylomes.
Front Plant Sci. (2017) Apr. 8: 504.
doi: 10.3389/fpls.2017.00504

Mensous M. et al.
Diversity and evolution of plastomes in Saharan mimosoids:potential use for phylogenetic and population genetic studies.
Tree Genetics Genomes (2017) Apr . 13:48.
doi: 10.1007/s11295-017-1131-2

Tarabay Y. et al.
Tex19 paralogs are new members of the piRNA pathway controlling retrotransposon suppression.
J Cell Sci. (2017) Apr. 130(8):1463-1474.
doi: 10.1242/jcs.188763

Arguel M.J. et al.
A cost effective 5?selective single cell transcriptome profiling approach with improved UMI design.
Nucleic Acids Res. (2017) Apr. 45(7):e48.
doi: 10.1093/nar/gkw1242

Quartier A. et al.
Intragenic FMR1 disease-causing variants: a significant mutational mechanism leading to Fragile-X syndrome.
Eur J Hum Genet. (2017)
doi: 10.1038/ejhg.2016.204

Dupont H. et al.
Structural alteration of OmpR as a source of ertapenem resistance in a CTX-M-15-producing Escherichia coli O25b:H4 sequence type 131 clinical isolate.
Antimicrob Agents Chemother. (2017) Apr. 61(5). pii: e00014-17.
doi: 10.1128/AAC.00014-17

Badouin H. et al.
Widespread selective sweeps throughout the genome of model plant pathogenic fungi and identification of effector candidates.
Mol Ecol. (2017) Apr. 26(7):2041-2062.
doi: 10.1111/mec.13976