Publications 2016

Martin, G. et al.
Improvement of the banana "Musa acuminata" reference sequence using NGS data and semi-automated bioinformatics methods
BMC Genomics. (2016) 17: p. 243
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Mathe-Hubert, H. et al.
Comparative venomics of Psyttalia lounsburyi and P-concolor, two olive fruit fly parasitoids: a hypothetical role for a GH1 beta-glucosidase
Scientific Reports. (2016) 6: p. e35873
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Molitor, A.M. et al.
The Arabidopsis hnRNP-Q Protein LIF2 and the PRC1 Subunit LHP1 Function in Concert to Regulate the Transcription of Stress-Responsive Genes
Plant Cell. (2016) 28(9): p. 2197-2211
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Petitot, A.S. et al.
Dual RNA-seq reveals Meloidogyne graminicola transcriptome and candidate effectors during the interaction with rice plants
Molecular Plant Pathology. (2016) 17(6): p. 860-874
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Pichon, A. et al.
Parasitic wasps have domesticated viruses repeatedly during their evolution
M S-Medecine Sciences. (2016) 32(8-9): p. 699-703
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Plomion, C. et al.
Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies
Molecular Ecology Resources. (2016) 16(1): p. 254-265
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Plucain, J. et al.
Contrasting effects of historical contingency on phenotypic and genomic trajectories during a two-step evolution experiment with bacteria. BMC
Evolutionary Biology. (2016) 16: p. 86
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Roquet, C. et al.
Understanding the evolution of holoparasitic plants: the complete plastid genome of the holoparasite Cytinus hypocistis (Cytinaceae)
Annals of Botany. (2016) 118(5): p. 885-896
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Roux, S. et al.
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
Nature. (2016) 537(7622): p. 689-693
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Vanhove, A.S. et al.
Copper homeostasis at the host vibrio interface: lessons from intracellular vibrio transcriptomics
Environmental Microbiology. (2016) 18(3): p. 875-888
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Vannier, T. et al.
Survey of the green picoalga Bathycoccus genomes in the global ocean
Scientific Reports. (2016) 6: p. e37900
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Weissenbach J.
The rise of genomics
Comptes Rendus Biologies. (2016) 339(7-8): p. 231-239
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Weissenbach, J. et al.
Microbiotes and metagenomics
M S-Medecine Sciences. (2016) 32(11): p. 937-943
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Zhang, S.D. et al.
Genomic and physiological analysis reveals versatile metabolic capacity of deep-sea Photobacterium phosphoreum ANT-2200
Extremophiles. (2016) 20(3): p. 301-310
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Leitwein M. et al.
Genome-wide nucleotide diversity of hatchery-reared Atlantic and Mediterranean strains of brown trout Salmo trutta compared to wild Mediterranean populations
J Fish Biol. (2016) 89:2717-2734
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Aburjaile FF. et al.
Adaptation of Propionibacterium freudenreichii to long-term survival under gradual nutritional shortage
BMC Genomics. (2016) 17:1007
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Doublet V. et al.
Brain transcriptomes of honey bees (Apis mellifera) experimentally infected by two pathogens: Black queen cell virus and Nosema ceranae
Genom Data. (2016) 10:79-82
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Picard MA. et al.
Sex-Biased Transcriptome of Schistosoma mansoni: Host-Parasite Interaction, Genetic Determinants and Epigenetic Regulators Are Associated with Sexual Differentiation
PLoS Negl Trop Dis. (2016) 10:e0004930
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Pontvianne F. et al.
Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome
Cell Rep. (2016)16:1574-87
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Gautier M. et al.
Deciphering the wisent demographic and adaptive histories from individual whole-genome sequences
Mol Biol Evol. (2016) 33:2801-2814
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Bataillon T. et al.
A replicated climate change field experiment reveals rapid evolutionary response in an ecologically important soil invertebrate
Glob Chang Biol. (2016) 22:2370-9
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Pasquier J. et al.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database
BMC Genomics. (2016) 17:368
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Satgé C.et al
Reprogramming of DNA methylation is critical for nodule development in Medicago truncatula
Nat Plants
doi: 10.1038/nplants.2016.166

Guillem Rigaill et al.
Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis
Briefings in Bioinformatics 2016
doi: 10.1093/bib/bbw092

Stéphanie Bauché et al.
Impaired Presynaptic High-Affinity Choline Transporter Causes a Congenital Myasthenic Syndrome with Episodic Apnea
The American Journal of Human Genetics 2016, vol. 99, issue 3
doi: 10.1016/j.ajhg.2016.06.033

Kilan Le Guennec et al.
ABCA7 rare variants and Alzheimer disease risk
Neurology 2016, vol. 86, issue 23
doi: 10.1212/wnl.0000000000002627