Publications 2017

Tronik-Le Roux D. et al.
Novel landscape of HLA-G isoforms expressed in clear cell renal cell carcinoma patients.
Mol Oncol. (2017) Nov. 11(11):1561-1578.
doi: 10.1002/1878-0261

Chauvin C. et al.
High-throughput drug screening identifies Pazopanib and Clofilium Tosylate as promising treatments for Malignant Rhabdoid Tumors.
Cell Rep. (2017) Nov. 21(7):1737-1745.
doi: 10.1016/j.celrep.2017.10.076

Weill FX. et al.
Genomic history of the seventh pandemic of cholera in Africa.
Science (2017) Nov. 358(6364):785-789.
doi: 10.1126/science.aad5901

Warnke M. et al.
A patchwork pathway for oxygenase-independent degradation of side chain containing steroids.
Environ Microbiol. (2017) Nov. 19(11):4684-4699.
doi: 10.1111/1462-2920.13933

Domman D. et al.
Integrated view of Vibrio cholerae in the Americas.
Science (2017) Nov. 358(6364):789-793.
doi: 10.1126/science.aao2136

Chaix R. et al.
Epigenetic clock analysis in long-term meditators.
Psychoneuroendocrinol. (2017) Nov. 85:210-214.
doi: 10.1016/j.psyneuen.2017.08.016

Costea PI. et al.
Towards standards for human fecal sample processing in metagenomic studies.
Nat Biotechnol. (2017) Nov. 35(11):1069-1076.
doi: 10.1038/nbt.3960

Rousseau E. et al.
Estimating virus effective population size and selection without neutral markers.
PLoS Pathog. (2017) Nov.13(11):e1006702.
doi: 10.1371/journal.ppat.1006702

Abath Neto O. et al.
Common and variable clinical, histological, and imaging findings of recessive RYR1-related centronuclear myopathy patients.
Neuromuscul Disord. (2017) Nov. 27(11):975-985.
doi: 10.1016/j.nmd.2017.05.016

Salmier A. et al.
Virome analysis of two sympatric bat species (Desmodus rotundus and Molossus molossus) in French Guiana.
PLoS One (2017) Nov. 12(11):e0186943.
doi: 10.1371/journal.pone.0186943

Machado L. et al.
In situ fixation redefines quiescence and early activation of skeletal muscle stem cells.
Cell Rep. (2017) Nov. 21(7):1982-1993.
doi: 10.1016/j.celrep.2017.10.080

Ficko-Blean E. et al.
Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.
Nat Commun. (2017) Nov. 8(1):1685.
doi: 10.1038/s41467-017-01832-6

Zarif H. et al.
CD8(+) T cells are essential for the effects of enriched environment on hippocampus-dependent behavior, hippocampal neurogenesis and synaptic plasticity.
Brain Behav Immun. (2017) Nov. pii: S0889-1591(17)30517-2.
doi: 10.1016/j.bbi.2017.11.016

Milet C. et al.
Egr1 deficiency induces browning of inguinal subcutaneous white adipose tissue in mice.
Sci. Rep. (2017) Nov. 7(1):16153.
doi: 10.1038/s41598-017-16543-7

Medina C. et al.
Characterization of microRNAs from Arabidopsis galls highlights a role for miR159 in the plant response to the root-knot nematode Meloidogyne incognita.
New Phytol. (2017) Nov. 216(3):882-896.
doi: 10.1111/nph.14717

Ragheb R. et al.
Interplay between trauma and Pseudomonas entomophila infection in flies: a central role of the JNK pathway and CrebA.
Sci Rep. (2017) Nov. 7(1):16222.
doi: 10.1038/s41598-017-14969-7

Ragheb R. et al.
Vorinostat and Mithramycin A in combination therapy as an interesting strategy for the treatment of Sézary T lymphoma: a transcriptomic approach.
Arch Dermatol Res. (2017) Oct. 309(8):611-623.
doi: 10.1007/s00403-017-1761-0

Capela D. et al.
Recruitment of a lineage-specific virulence regulatorypathway promotes intracellular infection by a plant pathogen experimentally evolved into a legume symbiont.
Mol Biol Evol. (2017) Oct. 34(10):2503-2521.
doi: 10.1093/molbev/msx165

Auffret P. et al.
Draft genome sequence of enterohemorrhagic Escherichia coli O157:H7 strain MC2 isolated from cattlde in France.
Genome Announc. (2017) Oct. 5(40). pii: e01097-17.
doi: 10.1128/genomeA.01097-17

Kocher A. et al.
Evaluation of shortmitochondrial metabarcodes for the identification of Amazonian mammals.
Methods in Ecology and Evolution (2017) Oct. 8: 1276–1283.
doi: 10.1111/2041-210X.12729

Charmet R. et al.
Association of impaired renal function with venous thrombosis: A genetic risk score approach.
Thromb Res. (2017) Oct. 158:102-107.
doi: 10.1016/j.thromres.2017.08.015

Malfatti E. et al.
Recessive myopalladin mutations cause congenital cap myopathy with unusual rods.
Neuromus. Dis. (2017) Oct. 27: S185-S185.
doi: 10.1016/j.nmd.2017.06.331

Nelson I. et al.
Novel recessive splice site mutation in POPDC1 (BVES) is associated with first-degree atrioventricular block and muscular dystrophy.
Neuromus. Dis. (2017) Oct. 27: S139-S140.
doi: 10.1016/j.nmd.2017.06.172

Troudet R. et al.
RNA signature and prediction to treatment response in first episode schizophrenia.
European Neuropsychopharm. (2017) Oct. 27: S597-S597.
doi: 10.1016/S0924-977X(17)31139-2

Martins RM. et al.
An ApiAP2 member regulates expression of clonally variant genes of the human malaria parasite Plasmodium falciparum.
Sci Rep. (2017) Oct.7(1):14042.
doi: 10.1038/s41598-017-12578-y

Cabanel N. et al.
Molecular bases for multidrug resistance in Yersinia pseudotuberculosis.
Int J Med Microbiol. (2017) Oct. 307(7):371-381.
doi: 10.1016/j.ijmm.2017.08.005

Bal E. et al.
Mutations in ACTRT1 and its enhancer RNA elements lead to aberrant activation of Hedgehog signaling in inherited and sporadic basal cell carcinomas.
Nat Med. (2017) Oct. 23(10):1226-1233.
doi: 10.1038/nm.4368

Danchin EGJ. et al.
The transcriptomes of Xiphinema index and Longidorus elongatus suggest independent acquisition of some plant parasitism genes by horizontal gene transfer in early-branching Nematodes.
Genes (2017) Oct. 8(10). pii: E287.
doi: 10.3390/genes8100287

Fournier T. et al.
High-Quality de novo genome assembly of the Dekkera bruxellensis yeast using nanopore MinION sequencing.
G3 (2017) Oct. 7(10):3243-3250.
doi: 10.1534/g3.117.300128

Gervais J. et al.
Different waves of effector genes with contrasted genomic location are expressed by Leptosphaeria maculans during cotyledon and stem colonization of oilseed rape.
Mol Plant Pathol. (2017) Oct. 18(8):1113-1126.
doi: 10.1111/mpp.12464