Publications 2015

Ravens S. et al.
Tip60 complex binds to active Pol II promoters and a subset of enhancers and co-regulates the c-Myc network in mouse embryonic stem cells
Epigenetics Chromatin. 2015 Nov 6;8:45.
doi: 10.1186/s13072-015-0039-z

Oravecz A. et al.
Ikaros mediates gene silencing in T cells through Polycomb repressive complex 2
Nat Commun. 2015 Nov 9;6:8823
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Lluch J. et al.
The Characterization of Novel Tissue Microbiota Using an Optimized 16S Metagenomic Sequencing Pipeline
PLoS One. 2015 Nov 6;10(11):e0142334
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Mirzaa GM. et al.
Characterisation of mutations of the phosphoinositide-3-kinase regulatory subunit, PIK3R2, in perisylvian polymicrogyria: a next-generation sequencing study
Lancet Neurol. 2015, 14 (12): p. 1182-1195
doi: 10.1016/S1474-4422(15)00278

Portal MM. et al.
TARDIS, a targeted RNA directional sequencing method for rare RNA discovery
Nat Protoc. 2015 Dec;10(12):1915-38
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Siudeja K. et al.
Frequent Somatic Mutation in Adult Intestinal StemCells Drives Neoplasia and Genetic Mosaicism during Aging
Cell Stem Cell.
doi: 10.1016/j.stem.2015.09.016

Rupp R. et al.
A Point Mutation in Suppressor of Cytokine Signalling 2 (Socs2) Increases the Susceptibility to Inflammation of the Mammary Gland while Associated with Higher Body Weight and Size and Higher Milk Production in a Sheep Model
PLoS Genet. 2015 Dec 11;11(12):e1005629
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Guigon I. et al.
Finding and analysing microRNAs in plant genomes with miRkwood
Actes de JOBIM 2015
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Almeida P. et al.
A population genomics insight into the Mediterranean origins of wine yeast domestication
Molecular Ecology. 2015, 24(21):5412-5427
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Alves-Carvalho S. et al.
Full-length de novo assembly of RNA-seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species
Plant Journal. 2015, 84(1):1-19
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Balzano S. et al.
Transcriptome analyses to investigate symbiotic relationships between marine protists
Frontiers in Microbiology. 2015, 6:98
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Benjelloun B. et al.
Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data
Frontiers in genetics. 2015, 6:107
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Bezier A. et al.
The Genome of the Nucleopolyhedrosis-Causing Virus from Tipula oleracea Sheds New Light on the Nudiviridae Family
Journal of Virology. 2015, 89(6):3008-3025
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Casquet J. et al.
Community assembly on remote islands : a comparison of Hawaiian and Mascarene spiders
Journal of Biogeography. 2015, 42(1):39-50
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Chateigner A. et al.
Ultra Deep Sequencing of a Baculovirus Population Reveals Widespread Genomic Variations
Viruses-Basel. 2015, 7(7):3625-3646
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Chevignon G. et al.
Transcriptomic response of Manduca sexta immune tissues to parasitization by the bracovirus associated wasp Cotesia congregata
Insect Biochemistry and Molecular Biology. 2015, 62:86-99
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Clerissi C. et al.
Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes
Environmental Microbiology Reports. 2015, 7(6):979-989
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Czernic P. et al.
Convergent Evolution of Endosymbiont Differentiation in Dalbergioid and Inverted Repeat-Lacking Clade Legumes Mediated by Nodule-Specific Cysteine-Rich Peptides
Plant physiology. 2015, 169(2):1254-1265
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Depaquit J. et al.
Mitochondrial DNA Intraspecific Variability in Sergentomyia minuta (Diptera : Psychodidae)
Journal of Medical Entomology. 2015, 52(5):819-828
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Dumas P. et al.
Spodoptera frugiperda (Lepidoptera : Noctuidae) host-plant variants : two host strains or two distinct species ?
Genetica. 2015, 143(3):305-316
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Esquer-Garrigos Y. et al.
Detecting natural hybridization between two vulnerable Andean pupfishes (Orestias agassizii and O-luteus) representative of the Altiplano endemic fisheries
Conservation Genetics. 2015, 16(3):717-727
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Farasin J. et al.
Thiomonas sp CB2 is able to degrade urea and promote toxic metal precipitation in acid mine drainage waters supplemented with urea
Frontiers in Microbiology. 2015, 6:993
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Fontanillas E. et al.
Degeneration of the Nonrecombining Regions in the Mating-Type Chromosomes of the Anther-Smut Fungi
Molecular Biology and Evolution. 2015, 32(4):928-943
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Foucher F. et al.
Towards the Rose Genome Sequence and Its Use in Research and Breeding. In : Vi International Symposium on Rose Research and Cultivation. Edited by Debener T, Linde M, 1064. Leuven 1 :
Int Soc Horticultural Science . 2015 : 167-175
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Freel KC. et al.
Adaptation in Toxic Environments : Arsenic Genomic Islands in the Bacterial Genus Thiomonas
PLoS One. 2015, 10(9) :e0139011
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Fuchs J. et al.
The complex phylogeography of the Indo-Malayan Alophoixus bulbuls with the description of a putative new ring species complex
Molecular Ecology. 2015, 24(21):5460-5474
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Galimand M. et al.
AAC(3)-XI, a New Aminoglycoside 3-N-Acetyltransferase from Corynebacterium striatum
Antimicrobial Agents and Chemotherapy. 2015, 59(9):5647-5653
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Gasmi L. et al.
Recurrent Domestication by Lepidoptera of Genes from Their Parasites Mediated by Bracoviruses
Plos Genetics. 2015, 11(9) :e1005470
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Goudenege D. et al.
A single regulatory gene is sufficient to alter Vibrio aestuarianus pathogenicity in oysters
Environmental Microbiology. 2015,17(11):4189-4199
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Grosjean S. et al.
Improving biodiversity assessment of anuran amphibians using DNA barcoding of tadpoles. Case studies from Southeast Asia
Comptes Rendus Biologies 2015, 338(5):351-361
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